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  5. Solyc01g111800.4.1

Solyc01g111800.4.1 (Solyc01g111800)


Aliases : Solyc01g111800

Description : amino acid transporter (LAT)


Gene families : OG0000891 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000891_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g111800.4.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00217p00018260 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Adi_g022139 No alias amino acid transporter *(LAT) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05668 No alias amino acid transporter *(LAT) & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os03g25869.1 LOC_Os03g25869 amino acid transporter (LAT) 0.03 OrthoFinder output from all 47 species
Solyc08g005540.2.1 Solyc08g005540 amino acid transporter (LAT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 18 404
No external refs found!