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  5. Solyc02g014780.1.1

Solyc02g014780.1.1 (YCF2.1, Solyc02g014780)


Aliases : YCF2.1, Solyc02g014780

Description : Protein Ycf2 OS=Nicotiana tabacum (sp|p09976|ycf2_tobac : 133.0)


Gene families : OG0003470 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003470_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g014780.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00217120 YCF2.1,... Protein Ycf2 OS=Amborella trichopoda 0.01 OrthoFinder output from all 47 species
ATCG00860 YCF2.1 Chloroplast Ycf2;ATPase, AAA type, core 0.04 OrthoFinder output from all 47 species
ATCG01280 YCF2.2 Chloroplast Ycf2;ATPase, AAA type, core 0.04 OrthoFinder output from all 47 species
GSVIVT01029119001 YCF2.1 Protein Ycf2 OS=Vitis vinifera 0.06 OrthoFinder output from all 47 species
GSVIVT01029605001 No alias Protein Ycf2 OS=Vitis vinifera 0.05 OrthoFinder output from all 47 species
Solyc00g500037.1.1 YCF2.1, Solyc00g500037 regulatory component YCF2 of AAA-ATPase motor complex 0.02 OrthoFinder output from all 47 species
Solyc00g500046.1.1 YCF2.1, Solyc00g500046 regulatory component YCF2 of AAA-ATPase motor complex 0.02 OrthoFinder output from all 47 species
Solyc00g500081.1.1 YCF2.1, Solyc00g500081 regulatory component YCF2 of AAA-ATPase motor complex 0.02 OrthoFinder output from all 47 species
Solyc00g500128.1.1 YCF2.1, Solyc00g500128 regulatory component YCF2 of AAA-ATPase motor complex 0.02 OrthoFinder output from all 47 species
Solyc00g500198.1.1 YCF2.1, Solyc00g500198 regulatory component YCF2 of AAA-ATPase motor complex 0.02 OrthoFinder output from all 47 species
Solyc00g500327.1.1 YCF2.1, Solyc00g500327 regulatory component YCF2 of AAA-ATPase motor complex 0.02 OrthoFinder output from all 47 species
Solyc01g017130.1.1 YCF2.1, Solyc01g017130 Protein Ycf2 OS=Solanum tuberosum (sp|q27ry7|ycf2_soltu : 147.0) 0.07 OrthoFinder output from all 47 species
Solyc01g017280.1.1 YCF2.1, Solyc01g017280 Protein Ycf2 OS=Solanum lycopersicum... 0.11 OrthoFinder output from all 47 species
Solyc03g020090.1.1 YCF2.1, Solyc03g020090 Protein Ycf2 OS=Daucus carota (sp|q0g9q1|ycf2_dauca : 187.0) 0.02 OrthoFinder output from all 47 species
Solyc03g058250.1.1 YCF2.1, Solyc03g058250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g029410.1.1 YCF2.1, Solyc08g029410 Protein Ycf2 OS=Solanum lycopersicum... 0.09 OrthoFinder output from all 47 species
Solyc09g031850.1.1 YCF2.1, Solyc09g031850 Protein Ycf2 OS=Solanum tuberosum (sp|q27ry7|ycf2_soltu : 146.0) 0.05 OrthoFinder output from all 47 species
Solyc11g062040.1.1 YCF2.1, Solyc11g062040 Protein Ycf2 A OS=Atropa belladonna... 0.08 OrthoFinder output from all 47 species
Solyc12g035760.1.1 YCF2.1, Solyc12g035760 Protein Ycf2 A OS=Atropa belladonna... 0.03 OrthoFinder output from all 47 species
Solyc12g035790.2.1 YCF2.1, Solyc12g035790 regulatory component YCF2 of AAA-ATPase motor complex 0.03 OrthoFinder output from all 47 species
Solyc12g035970.1.1 YCF2.1, Solyc12g035970 Protein Ycf2 OS=Solanum lycopersicum... 0.05 OrthoFinder output from all 47 species
Solyc12g035990.1.1 YCF2.1, Solyc12g035990 Protein Ycf2 OS=Solanum bulbocastanum... 0.2 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!