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  5. Solyc02g021420.3.1

Solyc02g021420.3.1 (VLN4, ATVLN4, Solyc02g021420)


Aliases : VLN4, ATVLN4, Solyc02g021420

Description : villin actin-crosslinking factor


Gene families : OG0000479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g021420.3.1

Target Alias Description ECC score Gene Family Method Actions
AT2G41740 ATVLN2, VLN2 villin 2 0.06 OrthoFinder output from all 47 species
Als_g12863 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40168 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04783 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12931 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38086 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30356.t1 VLN4, ATVLN4,... villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0277.g061478 ATVLN3, VLN3 villin actin-crosslinking factor & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g05233 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G056400.1 ATVLN3, VLN3,... villin actin-crosslinking factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g07178 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04950 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029237001 VLN4, ATVLN4 Cytoskeleton.microfilament network.actin... 0.08 OrthoFinder output from all 47 species
GSVIVT01033261001 ATVLN2, VLN2 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Gb_23115 VLN4, ATVLN4 villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Gb_23117 VLN4, ATVLN4 villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Gb_31397 ATVLN3, VLN3 villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Gb_40777 ATVLN3, VLN3 villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
LOC_Os04g51440.1 VLN4, ATVLN4,... villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
LOC_Os06g44890.1 VLN4, ATVLN4,... villin actin-crosslinking factor 0.06 OrthoFinder output from all 47 species
Len_g29289 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29649 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429481g0030 VLN4, ATVLN4 villin actin-crosslinking factor 0.04 OrthoFinder output from all 47 species
MA_9118625g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g09750.1 ATVLN2, VLN2 villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
Msp_g01236 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31948 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12930 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12233 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017480 VLN4, ATVLN4 villin actin-crosslinking factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g12531 No alias villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo177604 ATVLN2, VLN2 Cytoskeleton.microfilament network.actin... 0.04 OrthoFinder output from all 47 species
Solyc10g080100.3.1 ATVLN2, VLN2,... villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
Spa_g47063 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001712_P002 ATVLN2, VLN2,... villin actin-crosslinking factor 0.05 OrthoFinder output from all 47 species
Zm00001e010507_P006 VLN4, ATVLN4,... villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Zm00001e018617_P001 ATVLN2, VLN2,... villin actin-crosslinking factor 0.04 OrthoFinder output from all 47 species
Zm00001e037689_P003 VLN4, ATVLN4,... villin actin-crosslinking factor 0.05 OrthoFinder output from all 47 species
Zm00001e038175_P001 ATVLN2, VLN2,... villin actin-crosslinking factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR003128 Villin_headpiece 938 973
IPR007123 Gelsolin-like_dom 266 337
IPR007123 Gelsolin-like_dom 31 111
IPR007123 Gelsolin-like_dom 638 711
IPR007123 Gelsolin-like_dom 150 200
No external refs found!