Aliases : ATVPS54, VPS54, Solyc02g030100
Description : Vacuolar protein sorting-associated protein 54, chloroplastic OS=Arabidopsis thaliana (sp|f4jt76|vps54_arath : 268.0)
Gene families : OG0004672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004672_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G19490 | ATVPS54, VPS54 | VPS54 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g063596 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g02680 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g05127 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g08788 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| Cre02.g087551 | ATVPS54, VPS54 | Vesicle trafficking.target membrane tethering.GARP/EARP... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g12433 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06203 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_03763 | ATVPS54, VPS54 | GARP-specific component VPS54 of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g13470.1 | ATVPS54, VPS54,... | GARP-specific component VPS54 of GARP/EARP... | 0.07 | OrthoFinder output from all 47 species | |
| Len_g01396 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g02410 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g09490.1 | ATVPS54, VPS54 | GARP-specific component VPS54 of GARP/EARP... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g16046 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g03262 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g22745 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e008702_P001 | ATVPS54, VPS54,... | GARP-specific component VPS54 of GARP/EARP... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e040599_P001 | ATVPS54, VPS54,... | GARP-specific component VPS54 of GARP/EARP... | 0.09 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006813 | potassium ion transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| BP | GO:0016197 | endosomal transport | IEP | HCCA |
| BP | GO:0016482 | cytosolic transport | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
