Solyc02g030280.2.1 (Solyc02g030280)


Aliases : Solyc02g030280

Description : Putative disease resistance protein RGA4 OS=Solanum bulbocastanum (sp|q7xa39|rga4_solbu : 144.0)


Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g030280.2.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000666001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.03 OrthoFinder output from all 47 species
GSVIVT01011193001 No alias Putative disease resistance RPP13-like protein 1... 0.02 OrthoFinder output from all 47 species
GSVIVT01013307001 No alias Putative disease resistance RPP13-like protein 1... 0.02 OrthoFinder output from all 47 species
GSVIVT01031998001 No alias Putative disease resistance protein At3g14460... 0.03 OrthoFinder output from all 47 species
GSVIVT01034675001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os07g17250.1 LOC_Os07g17250 Putative disease resistance protein At3g14460... 0.02 OrthoFinder output from all 47 species
LOC_Os08g42930.1 LOC_Os08g42930 Disease resistance protein RGA2 OS=Solanum bulbocastanum... 0.04 OrthoFinder output from all 47 species
LOC_Os08g43050.1 LOC_Os08g43050 Putative disease resistance protein RGA1 OS=Solanum... 0.04 OrthoFinder output from all 47 species
LOC_Os09g14490.1 LOC_Os09g14490 Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA

No InterPro domains available for this sequence

No external refs found!