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  5. Solyc02g063340.1.1

Solyc02g063340.1.1 (Solyc02g063340)


Aliases : Solyc02g063340

Description : Polcalcin Nic t 2 OS=Nicotiana tabacum (sp|q8vwy7|polc2_tobac : 139.0)


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g063340.1.1

Target Alias Description ECC score Gene Family Method Actions
AT1G24620 No alias EF hand calcium-binding protein family 0.08 OrthoFinder output from all 47 species
AT3G03430 No alias Calcium-binding EF-hand family protein 0.08 OrthoFinder output from all 47 species
AT5G17480 APC1, PC1 pollen calcium-binding protein 1 0.06 OrthoFinder output from all 47 species
Aspi01Gene40092.t2 Aspi01Gene40092 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67147.t1 Aspi01Gene67147 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G032400.1 TCH2, CML24,... calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g00276 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03255 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_03898 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_37767 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g72100.1 LOC_Os01g72100 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os08g44660.1 APC1, PC1, LOC_Os08g44660 Polcalcin Phl p 7 OS=Phleum pratense... 0.07 OrthoFinder output from all 47 species
Msp_g20815 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g01910 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 15 72
No external refs found!