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  5. Solyc02g064630.4.1

Solyc02g064630.4.1 (ATTRB1, TRB1, Solyc02g064630)


Aliases : ATTRB1, TRB1, Solyc02g064630

Description : PRC2-recruiting factor (TRB). transcription factor (MYB-related)


Gene families : OG0000994 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000994_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g064630.4.1

Target Alias Description ECC score Gene Family Method Actions
Als_g00855 ATTRB1, TRB1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020538.49 TRFL3 No description available 0.02 OrthoFinder output from all 47 species
Gb_33585 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g41920.2 ATTRB1, TRB1,... PRC2-recruiting factor (TRB). transcription factor (MYB-related) 0.07 OrthoFinder output from all 47 species
Solyc11g044320.2.1 ATTRB1, TRB1,... PRC2-recruiting factor (TRB). transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 5 56
IPR005818 Histone_H1/H5_H15 124 181
No external refs found!