Solyc02g065290.1.1 (Solyc02g065290)

Aliases : Solyc02g065290

Description : transcription factor (DOF)

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g065290.1.1

Target	Alias	Description	ECC score	Gene Family Method
AT3G52440	No alias	Dof-type zinc finger DNA-binding family protein	0.05	OrthoFinder output from all 47 species
AT4G24060	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
AT5G66940	No alias	Dof-type zinc finger DNA-binding family protein	0.06	OrthoFinder output from all 47 species
Als_g03156	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g39186	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g51755	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene18959.t1	ADOF1, DOF1,...	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0176.g056104	No alias	transcription factor *(DOF) & original description: CDS=1-1632	0.03	OrthoFinder output from all 47 species
Cba_g44942	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.19G053600.1	ADOF1, DOF1,...	transcription factor *(DOF) & original description:...	0.05	OrthoFinder output from all 47 species
Dac_g43968	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g04621	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g26758	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g02493	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g16037	ADOF2, DOF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os02g49440.1	ADOF1, DOF1,...	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
LOC_Os05g02150.1	OBP3, LOC_Os05g02150	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os12g38200.1	LOC_Os12g38200	transcription factor (DOF)	0.07	OrthoFinder output from all 47 species
Lfl_g25249	CDF2	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g11813	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g19399	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008715	TMO6	transcription factor *(DOF) & original description: CDS=1-1413	0.02	OrthoFinder output from all 47 species
Sam_g26799	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Smo89924	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
Solyc01g096120.3.1	DAG1, Solyc01g096120	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc06g062520.1.1	ADOF1, DOF1,...	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc06g075370.3.1	TMO6, Solyc06g075370	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Zm00001e002951_P002	Zm00001e002951	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e003086_P001	ADOF1, DOF1,...	transcription factor (DOF)	0.07	OrthoFinder output from all 47 species
Zm00001e004476_P002	Zm00001e004476	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e019764_P001	Zm00001e019764	transcription factor (DOF)	0.07	OrthoFinder output from all 47 species
Zm00001e023218_P004	Zm00001e023218	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006835	dicarboxylic acid transport	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
MF	GO:0015035	protein-disulfide reductase activity	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015740	C4-dicarboxylate transport	IEP	HCCA
BP	GO:0015743	malate transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	28	84

External Links

No external refs found!

Solyc02g065290.1.1 (Solyc02g065290)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation