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  5. Solyc02g067330.1.1

Solyc02g067330.1.1 (MIF2, Solyc02g067330)


Aliases : MIF2, Solyc02g067330

Description : transcription factor (zf-HD)


Gene families : OG0000204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000204_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g067330.1.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00074870 MIF2,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
AT1G14440 AtHB31, ZHD4, HB31 homeobox protein 31 0.03 OrthoFinder output from all 47 species
AT1G75240 AtHB33, ZHD5, HB33 homeobox protein 33 0.03 OrthoFinder output from all 47 species
AT3G28917 MIF2 mini zinc finger 2 0.04 OrthoFinder output from all 47 species
AT5G15210 ZHD8, ATHB30, ZFHD3, HB30 homeobox protein 30 0.03 OrthoFinder output from all 47 species
Aev_g48693 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27958 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49721.t1 AtHB31, ZHD4,... zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0149.g053216 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: CDS=1-636 0.02 OrthoFinder output from all 47 species
Cba_g07428 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12626 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g23511 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011415001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Gb_30985 ATHB22, MEE68, ZHD2, HB22 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
LOC_Os02g47770.1 ATHB22, MEE68,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
LOC_Os04g35500.1 ATHB22, MEE68,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
LOC_Os09g24820.1 ATHB29, ZFHD1,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
LOC_Os12g03110.1 MIF2, LOC_Os12g03110 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
MA_19630g0020 ATHB22, MEE68, ZHD2, HB22 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
MA_91212g0010 MIF2 transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
Ppi_g14429 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g54527 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g102980.3.1 AtHB31, ZHD4,... transcription factor (zf-HD) 0.04 OrthoFinder output from all 47 species
Solyc02g085160.1.1 AtHB24, ZHD6,... transcription factor (zf-HD) 0.04 OrthoFinder output from all 47 species
Spa_g02633 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51193 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 30 82
No external refs found!