Solyc02g068090.3.1 (GHS1, Solyc02g068090)

Aliases : GHS1, Solyc02g068090

Description : component mtRPS21|psRPS21 of mitochondrial ribosome small ribosomal subunit proteome. component psRPS21|mtRPS21 of small ribosomal subunit proteome

Gene families : OG0004103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004103_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g068090.3.1

Target	Alias	Description	ECC score	Gene Family Method
Aev_g09196	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Als_g01448	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Aob_g02683	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.11	OrthoFinder output from all 47 species
Aop_g18482	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Azfi_s0003.g007465	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Cba_g02864	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Cba_g08732	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Ceric.13G030700.1	Ceric.13G030700	component *(bS21c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000863.30	No alias	Protein biosynthesis.organelle translation...	0.01	OrthoFinder output from all 47 species
Cre01.g017300	No alias	Protein biosynthesis.organelle translation...	0.08	OrthoFinder output from all 47 species
Dac_g01906	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Dcu_g41032	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.12	OrthoFinder output from all 47 species
Dde_g05601	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Ehy_g00353	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
LOC_Os02g09590.1	GHS1, LOC_Os02g09590	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.11	OrthoFinder output from all 47 species
Len_g15740	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Lfl_g02717	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.09	OrthoFinder output from all 47 species
Lfl_g18474	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
MA_249305g0010	No alias	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.02	OrthoFinder output from all 47 species
Mp4g21580.1	No alias	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.17	OrthoFinder output from all 47 species
Msp_g36586	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Nbi_g05106	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Ore_g01870	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Ore_g05303	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Ppi_g01614	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007775	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.09	OrthoFinder output from all 47 species
Smo444102	No alias	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
Spa_g18473	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Zm00001e025066_P001	GHS1, Zm00001e025066	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006541	glutamine metabolic process	IEP	HCCA
BP	GO:0006542	glutamine biosynthetic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006729	tetrahydrobiopterin biosynthetic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
MF	GO:0008124	4-alpha-hydroxytetrahydrobiopterin dehydratase activity	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
MF	GO:0008942	nitrite reductase [NAD(P)H] activity	IEP	HCCA
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	HCCA
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015252	proton channel activity	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
MF	GO:0016211	ammonia ligase activity	IEP	HCCA
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019751	polyol metabolic process	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
BP	GO:0034311	diol metabolic process	IEP	HCCA
BP	GO:0034312	diol biosynthetic process	IEP	HCCA
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	HCCA
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046146	tetrahydrobiopterin metabolic process	IEP	HCCA
BP	GO:0046165	alcohol biosynthetic process	IEP	HCCA
BP	GO:0046173	polyol biosynthetic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0046857	oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor	IEP	HCCA
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0098809	nitrite reductase activity	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001911	Ribosomal_S21	93	147

External Links

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Solyc02g068090.3.1 (GHS1, Solyc02g068090)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation