Aliases : Solyc02g069500
Description : Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana (sp|q9ste1|pp333_arath : 863.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00113430 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g18485... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00252350 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g22690... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00022p00252600 | MEF1 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00084p00089150 | OTP86,... | Pentatricopeptide repeat-containing protein At3g63370,... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g003776 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g003802 | SLO1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g004418 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g005549 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g007536 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g014368 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g023974 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g024583 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g034273 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g034364 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g066083 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g068892 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g069020 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g072273 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g076457 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g080167 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g085510 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g097221 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g116035 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g04109 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12481 | OTP82 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g20999 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g26382 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g26450 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g31164 | SLO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g32458 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g03222 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g04452 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18796 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19114 | EMB2261 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g37979 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04156 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g18162 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene13090.t2 | Aspi01Gene13090 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene14074.t1 | CRR22, Aspi01Gene14074 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene18385.t1 | OTP82, Aspi01Gene18385 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene29787.t1 | Aspi01Gene29787 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene33810.t1 | Aspi01Gene33810 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34544.t1 | Aspi01Gene34544 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34954.t1 | Aspi01Gene34954 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene37377.t1 | Aspi01Gene37377 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene57232.t1 | Aspi01Gene57232 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene62647.t1 | Aspi01Gene62647 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000887 | No alias | not classified & original description: CDS=1-1611 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007914 | EMB2758 | not classified & original description: CDS=1-2235 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0010.g012358 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2001 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0011.g012689 | No alias | not classified & original description: CDS=1-2352 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0033.g025053 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2580 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0037.g025886 | No alias | not classified & original description: CDS=1-2634 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0115.g046284 | No alias | not classified & original description: CDS=76-2679 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0126.g048645 | No alias | not classified & original description: CDS=1-2262 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0128.g048776 | No alias | not classified & original description: CDS=1-1662 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0195.g057240 | No alias | not classified & original description: CDS=1-2328 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0676.g081825 | No alias | not classified & original description: CDS=1-2163 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07238 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g12399 | DOT4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g19555 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20760 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g67733 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.15G077400.1 | Ceric.15G077400 | not classified & original description: pacid=50640137... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g03363 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g30041 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g07619 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g08450 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g23389 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36645 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g46210 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g02940 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g03570 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g05920 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g09930 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g22326 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g22355 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g24793 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28079 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g36368 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g46766 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g49996 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g50253 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g50292 | SLO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008721001 | No alias | Pentatricopeptide repeat-containing protein At5g40410,... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18947 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g33974 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g02375 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06627 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07093 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g35084 | OTP85 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g37426 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_3462g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g03214 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g14364 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g28799 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g33676 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g41257 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g43428 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04450 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g25097 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g25278 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g40763 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g15676 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g34280 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g47008 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g16101 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g16163 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g20310 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g23569 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g29968 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g30070 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30107 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05156 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05264 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05328 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06482 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06906 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g07515 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g11996 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g28712 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005702 | No alias | not classified & original description: CDS=46-1077 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007672 | No alias | not classified & original description: CDS=1-2547 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0029.g010179 | No alias | not classified & original description: CDS=88-2685 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0036.g011714 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2064 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0055.g014482 | No alias | not classified & original description: CDS=1-1119 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0057.g014767 | OTP84 | not classified & original description: CDS=399-2006 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0200.g025587 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g03180 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g08419 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16066 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g30172 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo105729 | No alias | Pentatricopeptide repeat-containing protein At2g03380,... | 0.02 | OrthoFinder output from all 47 species | |
| Smo111894 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | OrthoFinder output from all 47 species | |
| Smo92008 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.05 | OrthoFinder output from all 47 species | |
| Smo97289 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g006990.3.1 | Solyc07g006990 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g005090.3.1 | Solyc10g005090 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g04082 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g04710 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g17584 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 215 | 263 |
| IPR002885 | Pentatricopeptide_repeat | 317 | 360 |
| IPR002885 | Pentatricopeptide_repeat | 619 | 666 |
| IPR002885 | Pentatricopeptide_repeat | 519 | 566 |
| IPR002885 | Pentatricopeptide_repeat | 594 | 618 |
| IPR002885 | Pentatricopeptide_repeat | 118 | 145 |
| IPR002885 | Pentatricopeptide_repeat | 190 | 213 |
| IPR002885 | Pentatricopeptide_repeat | 695 | 718 |
| No external refs found! |
