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  5. Solyc02g069790.3.1

Solyc02g069790.3.1 (DRT111, Solyc02g069790)


Aliases : DRT111, Solyc02g069790

Description : pre-mRNA splicing factor (SPF45/RBM17)


Gene families : OG0007273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007273_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc02g069790.3.1

Target Alias Description ECC score Gene Family Method Actions
Ceric.11G091900.1 DRT111, Ceric.11G091900 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01441 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.03 OrthoFinder output from all 47 species
Dde_g23479 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.02 OrthoFinder output from all 47 species
Gb_32096 DRT111 pre-mRNA splicing factor (SPF45/RBM17) 0.03 OrthoFinder output from all 47 species
LOC_Os01g34190.1 DRT111, LOC_Os01g34190 pre-mRNA splicing factor (SPF45/RBM17) 0.02 OrthoFinder output from all 47 species
Ore_g10943 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e034397_P001 DRT111, Zm00001e034397 pre-mRNA splicing factor (SPF45/RBM17) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 309 368
IPR000467 G_patch_dom 213 252
No external refs found!