Aliases : ATSS4, SS4, SSIV, Solyc02g071040
Description : starch synthase (SSIV)
Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00037p00164200 | ATSS3, SS3,... | Carbohydrate metabolism.starch... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G11720 | ATSS3, SS3 | starch synthase 3 | 0.06 | OrthoFinder output from all 47 species | |
| AT4G18240 | ATSS4, SS4, SSIV | starch synthase 4 | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g086856 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g087898 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g05532 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12175 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g13690 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g18951 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05131 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g17843 | ATSS4, SS4, SSIV | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g02168 | ATSS4, SS4, SSIV | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene43820.t1 | ATSS4, SS4,... | starch synthase *(SS4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g33306 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g08981 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g11357 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g43255 | ATSS4, SS4, SSIV | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_31910 | ATSS3, SS3 | starch synthase (SSIII) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g53310.1 | ATSS3, SS3,... | starch synthase (SSIII) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g43983 | ATSS3, SS3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g49747 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_64002g0010 | ATSS4, SS4, SSIV | Probable starch synthase 4, chloroplastic/amyloplastic... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g26184 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g17105 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02313 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g14771 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g27766 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g39876 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g43473 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0222.g026242 | ATSS3, SS3 | starch synthase *(SS3) & original description: CDS=271-2166 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g51042 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo154776 | ATSS3, SS3 | Carbohydrate metabolism.starch... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26732 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e027473_P001 | ATSS4, SS4,... | starch synthase (SSIV) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| No external refs found! |
