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  5. Solyc02g077250.2.1

Solyc02g077250.2.1 (TCP4, MEE35, Solyc02g077250)


Aliases : TCP4, MEE35, Solyc02g077250

Description : transcription factor (TCP)


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g077250.2.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00158020 TCP4, MEE35,... RNA biosynthesis.transcriptional activation.TCP... 0.05 OrthoFinder output from all 47 species
AMTR_s00154p00072430 TCP13, TFPD,... RNA biosynthesis.transcriptional activation.TCP... 0.05 OrthoFinder output from all 47 species
AT5G60970 TCP5 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.03 OrthoFinder output from all 47 species
Aev_g07745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18510 ATTCP24, TCP24 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40074 TCP10 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30172 ATTCP24, TCP24 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02917.t2 TCP3, Aspi01Gene02917 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02925.t1 TCP3, Aspi01Gene02925 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007839 TCP5 TCP-type transcription factor & original description: CDS=1-1389 0.03 OrthoFinder output from all 47 species
Azfi_s0168.g054602 TCP3 TCP-type transcription factor & original description: CDS=18-1559 0.03 OrthoFinder output from all 47 species
Cba_g37950 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G008200.1 TCP17, Ceric.27G008200 TCP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g18891 TCP2 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008109001 TCP5 RNA biosynthesis.transcriptional activation.TCP... 0.06 OrthoFinder output from all 47 species
GSVIVT01008234001 TCP12, BRC2 RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
GSVIVT01021528001 ATTCP24, TCP24 RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
GSVIVT01032911001 TCP13, TFPD, PTF1 RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
GSVIVT01036449001 TCP1 RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
Gb_17863 TCP3 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Gb_30049 TCP2 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Gb_35810 TCP2 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Gb_36354 TCP2 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Gb_38377 TCP2 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Gb_38379 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g55750.1 TCP5, LOC_Os01g55750 transcription factor (TCP) 0.07 OrthoFinder output from all 47 species
LOC_Os03g49880.1 TCP12, BRC2,... transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
LOC_Os03g57190.1 ATTCP24, TCP24,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
LOC_Os05g43760.1 TCP5, LOC_Os05g43760 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os09g24480.1 BRC1, ATTCP18,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os12g42190.1 ATTCP24, TCP24,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_101752g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_101752g0020 ATTCP24, TCP24 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_15254g0010 TCP13, TFPD, PTF1 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
MA_16704g0010 TCP2 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_35349g0010 TCP2 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
MA_547683g0010 TCP2 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
MA_78665g0010 TCP2 transcription factor (TCP) 0.06 OrthoFinder output from all 47 species
MA_86651g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g19590.1 TCP3 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Nbi_g10533 ATTCP24, TCP24 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41668 TCP4, MEE35 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23969 TCP4, MEE35 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26630 TCP2 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26727 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02212 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g089020.2.1 TCP13, TFPD,... transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Solyc03g045030.2.1 TCP12, BRC2,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Solyc03g115010.3.1 TCP5, Solyc03g115010 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Solyc04g006980.1.1 TCP12, BRC2,... transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Solyc05g009900.3.1 TCP12, BRC2,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc06g069240.2.1 TCP12, BRC2,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc06g069460.3.1 TCP5, Solyc06g069460 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Tin_g03446 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005407_P001 TCP12, BRC2,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Zm00001e009811_P001 BRC1, ATTCP18,... transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Zm00001e011911_P001 ATTCP24, TCP24,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e032821_P001 TCP2, Zm00001e032821 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Zm00001e034097_P001 BRC1, ATTCP18,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 116 208
No external refs found!