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  5. Solyc02g077960.3.1

Solyc02g077960.3.1 (TMO6, Solyc02g077960)


Aliases : TMO6, Solyc02g077960

Description : transcription factor (DOF)


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g077960.3.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00033p00212490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00210070 TMO6,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00059p00213350 ADOF1, DOF1,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AMTR_s00169p00055880 OBP4,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT1G29160 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT2G28510 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.05 OrthoFinder output from all 47 species
AT2G37590 DOF2.4, ATDOF2.4 DNA binding with one finger 2.4 0.03 OrthoFinder output from all 47 species
AT2G46590 DAG2 Dof-type zinc finger DNA-binding family protein 0.05 OrthoFinder output from all 47 species
AT3G21270 ADOF2, DOF2 DOF zinc finger protein 2 0.02 OrthoFinder output from all 47 species
AT3G45610 No alias Dof-type zinc finger DNA-binding family protein 0.04 OrthoFinder output from all 47 species
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G02460 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.07 OrthoFinder output from all 47 species
AT5G60850 OBP4 OBF binding protein 4 0.04 OrthoFinder output from all 47 species
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.04 OrthoFinder output from all 47 species
AT5G65590 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G66940 No alias Dof-type zinc finger DNA-binding family protein 0.07 OrthoFinder output from all 47 species
Adi_g007394 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024682 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g056971 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058001 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069664 OBP3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078316 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078561 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04769 OBP4 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g06704 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16804 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24071 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39679 CDF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03761 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20563 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g27376 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08641 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67430 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34893.t1 OBP4, Aspi01Gene34893 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37574.t1 OBP3, Aspi01Gene37574 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s1074.g096912 TMO6 transcription factor *(DOF) & original description: CDS=1-1176 0.02 OrthoFinder output from all 47 species
Azfi_s4159.g118156 TMO6 transcription factor *(DOF) & original description: CDS=1-876 0.02 OrthoFinder output from all 47 species
Cba_g00291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06470 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g39110 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G043000.1 TMO6, Ceric.11G043000 transcription factor *(DOF) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.14G083700.1 OBP4, Ceric.14G083700 transcription factor *(DOF) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.19G013700.1 TMO6, Ceric.19G013700 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.26G037300.1 TMO6, Ceric.26G037300 transcription factor *(DOF) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g06526 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07953 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31731 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07485 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05330 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02493 OBP4 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04712 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12009 DOF2.4, ATDOF2.4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12302 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26839 CDF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005057001 TMO6 RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
GSVIVT01007758001 HCA2, DOF5.6 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01021085001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01021086001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01024986001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Gb_07177 CDF2 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Gb_28499 TMO6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os01g09720.1 ADOF2, DOF2,... transcription factor (DOF) 0.09 OrthoFinder output from all 47 species
LOC_Os01g64590.1 LOC_Os01g64590 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os02g15350.1 LOC_Os02g15350 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os03g07360.1 CDF3, LOC_Os03g07360 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os03g55610.1 ADOF2, DOF2,... transcription factor (DOF) 0.09 OrthoFinder output from all 47 species
LOC_Os03g60630.1 LOC_Os03g60630 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os04g47990.1 LOC_Os04g47990 transcription factor (DOF) 0.11 OrthoFinder output from all 47 species
LOC_Os05g02150.1 OBP3, LOC_Os05g02150 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os05g36900.1 LOC_Os05g36900 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os08g38220.1 LOC_Os08g38220 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os12g38200.1 LOC_Os12g38200 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Len_g29714 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01681 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g26281 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
MA_2430g0010 CDF3 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g18540.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g32354 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01077 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03668 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19321 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38953 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05846 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25217 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41458 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10327 No alias transcription factor *(DOF) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g16291 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28297 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32527 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31297 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61204 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007584 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1335 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008715 TMO6 transcription factor *(DOF) & original description: CDS=1-1413 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012148 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1128 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013517 CDF3 transcription factor *(DOF) & original description: CDS=154-1659 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020125 No alias transcription factor *(DOF) & original description: CDS=124-2595 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023228 No alias transcription factor *(DOF) & original description: CDS=1-1353 0.03 OrthoFinder output from all 47 species
Sam_g43145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49468 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Smo29563 OBP4 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Smo89924 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Solyc03g082840.3.1 DAG1, Solyc03g082840 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Solyc03g112930.3.1 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc04g070960.3.1 Solyc04g070960 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Solyc06g076030.3.1 Solyc06g076030 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Spa_g09440 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26148 CDF1 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g31006 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20763 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001988_P001 TMO6, Zm00001e001988 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e002951_P002 Zm00001e002951 transcription factor (DOF) 0.06 OrthoFinder output from all 47 species
Zm00001e004809_P001 CDF3, Zm00001e004809 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e005107_P001 ADOF1, DOF1,... transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Zm00001e005785_P001 ADOF2, DOF2,... transcription factor (DOF) 0.1 OrthoFinder output from all 47 species
Zm00001e007228_P002 Zm00001e007228 transcription factor (DOF) 0.07 OrthoFinder output from all 47 species
Zm00001e010454_P001 TMO6, Zm00001e010454 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e011750_P002 Zm00001e011750 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e012437_P001 ADOF1, DOF1,... transcription factor (DOF) 0.06 OrthoFinder output from all 47 species
Zm00001e015414_P004 Zm00001e015414 transcription factor (DOF) 0.08 OrthoFinder output from all 47 species
Zm00001e015597_P001 HCA2, DOF5.6,... transcription factor (DOF) 0.06 OrthoFinder output from all 47 species
Zm00001e018163_P001 Zm00001e018163 transcription factor (DOF) 0.08 OrthoFinder output from all 47 species
Zm00001e019172_P001 Zm00001e019172 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Zm00001e023218_P004 Zm00001e023218 transcription factor (DOF) 0.07 OrthoFinder output from all 47 species
Zm00001e023334_P001 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e027634_P002 OBP3, Zm00001e027634 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e029641_P001 OBP3, Zm00001e029641 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e031750_P001 Zm00001e031750 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e032133_P001 Zm00001e032133 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e034454_P001 ADOF1, DOF1,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e035074_P001 TMO6, Zm00001e035074 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Zm00001e041444_P001 Zm00001e041444 transcription factor (DOF) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 38 92
No external refs found!