Solyc02g078160.3.1 (Solyc02g078160)


Aliases : Solyc02g078160

Description : no hits & (original description: none)


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g078160.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00212610 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G77145 No alias Protein of unknown function (DUF506) 0.05 OrthoFinder output from all 47 species
Adi_g056039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g28669 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31327 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g63912 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene26590.t1 Aspi01Gene26590 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G087100.1 Ceric.01G087100 not classified & original description: pacid=50592608... 0.03 OrthoFinder output from all 47 species
Ceric.01G087300.1 Ceric.01G087300 not classified & original description: pacid=50591762... 0.02 OrthoFinder output from all 47 species
Dac_g04659 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g13363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005210001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01020560001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os10g28210.1 LOC_Os10g28210 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g25020.1 LOC_Os11g25020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g16439 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g40985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01755 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g11821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_29449g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_41471g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_6561322g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_82338g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g06137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26680 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g29263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10620 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g41587 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003040 No alias not classified & original description: CDS=1-1485 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008363 No alias not classified & original description: CDS=285-1409 0.04 OrthoFinder output from all 47 species
Sam_g11288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g007580.1.1 Solyc06g007580 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g06813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15489 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g16588 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26289 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g00957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 34 255
No external refs found!