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  5. Solyc02g079810.3.1

Solyc02g079810.3.1 (DYT1, Solyc02g079810)


Aliases : DYT1, Solyc02g079810

Description : transcription factor (bHLH)


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g079810.3.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT4G21330 DYT1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.08 OrthoFinder output from all 47 species
AT4G29930 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g106592 AMS bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62130 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15646 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11432 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19713 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35383.t1 AMS, Aspi01Gene35383 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44253.t1 Aspi01Gene44253 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007559 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-894 0.03 OrthoFinder output from all 47 species
Cba_g15970 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G112100.1 Ceric.01G112100 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G044000.1 Ceric.20G044000 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.38G035000.1 Ceric.38G035000 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g14460 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51705 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g27756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_15579 SCRM2, ICE2 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Gb_26391 ATBHLH029,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Gb_36380 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os10g39750.1 bHLH093, LOC_Os10g39750 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Len_g58793 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24609 ATBHLH029,... bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
MA_110122g0010 AMS transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_126263g0010 AMS transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_387150g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_666536g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_780853g0010 ATBHLH029,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Msp_g05689 ATICE1, ICE1, SCRM bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08918 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30612 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02789 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo431375 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc06g051550.4.1 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.04 OrthoFinder output from all 47 species
Spa_g32940 AMS bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39236 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54340 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010525_P001 DYT1, Zm00001e010525 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e025243_P003 AMS, Zm00001e025243 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 38 85
No external refs found!