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  5. Solyc02g080580.1.1

Solyc02g080580.1.1 (Solyc02g080580)


Aliases : Solyc02g080580

Description : no hits & (original description: none)


Gene families : OG0000217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g080580.1.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Aop_g16313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G107800.1 Ceric.02G107800 not classified & original description: pacid=50585116... 0.02 OrthoFinder output from all 47 species
Ceric.1Z000200.1 Ceric.1Z000200 not classified & original description: pacid=50640947... 0.07 OrthoFinder output from all 47 species
Dcu_g00650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g00841 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01033884001 No alias No description available 0.08 OrthoFinder output from all 47 species
LOC_Os01g54450.1 LOC_Os01g54450 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g64300.1 LOC_Os01g64300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g43990.1 LOC_Os04g43990 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g30513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_54260g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g37233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42452 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18742 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003978 No alias not classified & original description: CDS=1-753 0.04 OrthoFinder output from all 47 species
Sam_g04107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007566_P001 Zm00001e007566 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e019192_P001 Zm00001e019192 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035093_P001 Zm00001e035093 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 44 155
No external refs found!