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  5. Solyc02g087210.3.1

Solyc02g087210.3.1 (PMZ, SAP12, Solyc02g087210)


Aliases : PMZ, SAP12, Solyc02g087210

Description : C2H2 zinc finger transcription factor


Gene families : OG0002397 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g087210.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00239070 PMZ, SAP12,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AT2G41835 No alias zinc finger (C2H2 type, AN1-like) family protein 0.03 OrthoFinder output from all 47 species
Als_g29975 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g40601 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g00217 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g10313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27980.t2 Aspi01Gene27980 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54444.t1 Aspi01Gene54444 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G055100.1 PMZ, SAP12,... not classified & original description: pacid=50618072... 0.04 OrthoFinder output from all 47 species
Dac_g10488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13892 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g00572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01033300001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.07 OrthoFinder output from all 47 species
Gb_16838 No alias C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
LOC_Os09g21710.1 PMZ, SAP12,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Len_g20576 PMZ, SAP12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10026 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12360 PMZ, SAP12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 103 140
IPR000058 Znf_AN1 15 52
No external refs found!