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  5. Solyc02g088330.2.1

Solyc02g088330.2.1 (IBS1, Solyc02g088330)


Aliases : IBS1, Solyc02g088330

Description : protein kinase (CDK9)


Gene families : OG0000343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g088330.2.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00026630 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.CMGC kinase... 0.1 OrthoFinder output from all 47 species
AT1G03740 No alias Protein kinase superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G09600 No alias Protein kinase superfamily protein 0.1 OrthoFinder output from all 47 species
AT1G74330 No alias Protein kinase superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G01085 No alias Protein kinase superfamily protein 0.14 OrthoFinder output from all 47 species
AT4G10010 No alias Protein kinase superfamily protein 0.11 OrthoFinder output from all 47 species
AT5G39420 cdc2cAt CDC2C 0.16 OrthoFinder output from all 47 species
AT5G44290 No alias Protein kinase superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g013453 No alias EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Adi_g089238 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ala_g14796 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ala_g15168 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ala_g32305 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Als_g27681 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Als_g49575 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Als_g62901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23603 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Aop_g12616 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Aop_g31114 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Aspi01Gene01405.t1 Aspi01Gene01405 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Cba_g14082 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Cba_g20842 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ceric.08G060900.1 Ceric.08G060900 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ceric.1Z015500.1 Ceric.1Z015500 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ceric.37G054700.1 Ceric.37G054700 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dac_g02350 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dac_g16207 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dcu_g01845 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dcu_g05730 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ehy_g06172 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ehy_g13782 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
GSVIVT01011471001 IBS1 Protein modification.phosphorylation.CMGC kinase... 0.1 OrthoFinder output from all 47 species
GSVIVT01014335001 No alias Protein modification.phosphorylation.CMGC kinase... 0.04 OrthoFinder output from all 47 species
GSVIVT01023220001 No alias Protein modification.phosphorylation.CMGC kinase... 0.03 OrthoFinder output from all 47 species
GSVIVT01036431001 No alias Protein modification.phosphorylation.CMGC kinase... 0.04 OrthoFinder output from all 47 species
LOC_Os02g35300.1 LOC_Os02g35300 protein kinase (CDK9) 0.08 OrthoFinder output from all 47 species
LOC_Os03g22700.1 LOC_Os03g22700 protein kinase (CDK9) 0.05 OrthoFinder output from all 47 species
LOC_Os07g40550.1 IBS1, LOC_Os07g40550 protein kinase (CDK9) 0.03 OrthoFinder output from all 47 species
LOC_Os11g13860.1 LOC_Os11g13860 protein kinase (CDK9) 0.11 OrthoFinder output from all 47 species
Lfl_g04049 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Msp_g02474 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Msp_g02482 No alias EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Nbi_g03126 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Nbi_g29780 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Pir_g18975 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014247 No alias not classified & original description: CDS=745-1773 0.04 OrthoFinder output from all 47 species
Sam_g12387 No alias EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Sam_g12432 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sam_g29547 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sam_g30154 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Smo141733 No alias Protein modification.phosphorylation.CMGC kinase... 0.03 OrthoFinder output from all 47 species
Solyc07g053910.3.1 Solyc07g053910 protein kinase (CDK9) 0.04 OrthoFinder output from all 47 species
Spa_g13046 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Spa_g52648 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Tin_g05641 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Zm00001e010695_P004 IBS1, Zm00001e010695 protein kinase (CDK9) 0.01 OrthoFinder output from all 47 species
Zm00001e014840_P002 Zm00001e014840 protein kinase (CDK9) 0.11 OrthoFinder output from all 47 species
Zm00001e016519_P001 Zm00001e016519 protein kinase (CDK9) 0.03 OrthoFinder output from all 47 species
Zm00001e021285_P001 Zm00001e021285 protein kinase (CDK9) 0.1 OrthoFinder output from all 47 species
Zm00001e021863_P001 Zm00001e021863 protein kinase (CDK9) 0.02 OrthoFinder output from all 47 species
Zm00001e026001_P001 Zm00001e026001 protein kinase (CDK9) 0.03 OrthoFinder output from all 47 species
Zm00001e029167_P002 Zm00001e029167 protein kinase (CDK9) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 116 400
No external refs found!