Solyc02g091720.2.1 (Solyc02g091720)


Aliases : Solyc02g091720

Description : catalytic component GID2 of ubiquitin protein ligase complex


Gene families : OG0002380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002380_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g091720.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00020260 evm_27.TU.AmTr_v1... Protein RMD5 homolog OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Adi_g087312 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.03 OrthoFinder output from all 47 species
GSVIVT01038533001 No alias Protein RMD5 homolog OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
MA_10002g0020 No alias catalytic component GID2 of ubiquitin protein ligase complex 0.02 OrthoFinder output from all 47 species
Ore_g18852 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.02 OrthoFinder output from all 47 species
Pnu_g10988 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.03 OrthoFinder output from all 47 species
Zm00001e004470_P001 Zm00001e004470 catalytic component GID2 of ubiquitin protein ligase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0110154 RNA decapping IEP HCCA
BP GO:0110156 methylguanosine-cap decapping IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR027370 Znf-RING_euk 328 370
IPR024964 CTLH/CRA 150 290
No external refs found!