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  5. Solyc02g092600.3.1

Solyc02g092600.3.1 (Solyc02g092600)


Aliases : Solyc02g092600

Description : BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana (sp|q66gp0|sr1p1_arath : 216.0)


Gene families : OG0000584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g092600.3.1

Target Alias Description ECC score Gene Family Method Actions
Aob_g05235 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Aop_g17528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58334.t1 Aspi01Gene58334 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05247 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Ceric.19G029600.1 Ceric.19G029600 not classified & original description: pacid=50576619... 0.03 OrthoFinder output from all 47 species
Ehy_g13434 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Nbi_g01164 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Spa_g41434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0016073 snRNA metabolic process IEP HCCA
BP GO:0016180 snRNA processing IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034472 snRNA 3'-end processing IEP HCCA
BP GO:0034477 U6 snRNA 3'-end processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 3 80
No external refs found!