Aliases : Solyc02g093340
Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana (sp|q8w034|rnp1_arath : 147.0)
Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00049p00200350 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00188860 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00067p00185510 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.09 | OrthoFinder output from all 47 species | |
| AT2G33410 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G40490 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g022676 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g054784 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g054785 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g060246 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g116756 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g05289 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g19414 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g38419 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g12261 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g18355 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g11244 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g14658 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene69044.t1 | Aspi01Gene69044 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g008091 | No alias | not classified & original description: CDS=1-1311 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0015.g013740 | No alias | not classified & original description: CDS=1-1461 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0195.g057243 | No alias | not classified & original description: CDS=263-1516 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g02546 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g09256 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g15471 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g33385 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34526 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.04G042600.1 | Ceric.04G042600 | not classified & original description: pacid=50631655... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.24G054300.1 | Ceric.24G054300 | not classified & original description: pacid=50629415... | 0.03 | OrthoFinder output from all 47 species | |
| Cre10.g428200 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g01173 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g13471 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g50955 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g03771 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_29426 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_29428 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_32677 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_33012 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_39961 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g12850.1 | LOC_Os02g12850 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g37000.2 | LOC_Os06g37000 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g33230.1 | LOC_Os10g33230 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g09242 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g13554 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10432683g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| MA_125759g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
| MA_141102g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_473g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g08394 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g12149 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03296 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g19415 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g44409 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g00523 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g05996 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g09717 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g11176 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g17780 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g17528 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g10456 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000411 | No alias | not classified & original description: CDS=1-1413 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005784 | No alias | not classified & original description: CDS=1-3438 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g42383 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g42385 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g47484 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g50608 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g090520.3.1 | Solyc09g090520 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g11285 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g18077 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g21333 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g11723 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011415_P001 | Zm00001e011415 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014461_P003 | Zm00001e014461 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e024934_P002 | Zm00001e024934 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e030652_P001 | Zm00001e030652 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e037155_P004 | Zm00001e037155 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | HCCA |
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0031369 | translation initiation factor binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| No external refs found! |
