Aliases : Solyc03g005680
Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana (sp|q8w034|rnp1_arath : 252.0)
Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00049p00200350 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00067p00185510 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| AT1G58470 | RBP1, ATRBP1 | RNA-binding protein 1 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g054785 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g060246 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g078867 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g081638 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g112695 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g05289 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g19414 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g38855 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g08511 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g38419 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g12260 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g12261 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g03820 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g08667 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g11244 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g14658 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene21770.t1 | Aspi01Gene21770 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene41903.t1 | Aspi01Gene41903 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g008091 | No alias | not classified & original description: CDS=1-1311 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0149.g053226 | No alias | not classified & original description: CDS=547-1935 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g02546 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g09256 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g15471 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.19G061100.1 | Ceric.19G061100 | not classified & original description: pacid=50575703... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.24G054300.1 | Ceric.24G054300 | not classified & original description: pacid=50629415... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.38G017100.1 | Ceric.38G017100 | not classified & original description: pacid=50580043... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g15425 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g02961 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03771 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01014729001 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01028394001 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01032402001 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_04294 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_29426 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_29428 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_33012 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_35079 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g12850.1 | LOC_Os02g12850 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g33230.1 | LOC_Os10g33230 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g02314 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g13554 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10432683g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| MA_125759g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_141102g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_79622g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03296 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g19415 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19973 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g00523 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g05996 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g09717 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g20108 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g17528 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g10456 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25944 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g40264 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g42376 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g52022 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo4662 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g062730.2.1 | Solyc06g062730 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g090520.3.1 | Solyc09g090520 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g11285 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g21333 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g01925 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g07867 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e012709_P005 | Zm00001e012709 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e014461_P003 | Zm00001e014461 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e024336_P003 | Zm00001e024336 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e024934_P002 | Zm00001e024934 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e030652_P001 | Zm00001e030652 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.13 | OrthoFinder output from all 47 species | |
| Zm00001e037155_P004 | Zm00001e037155 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0031369 | translation initiation factor binding | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| No external refs found! |
