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  5. Solyc03g005820.3.1

Solyc03g005820.3.1 (Solyc03g005820)


Aliases : Solyc03g005820

Description : organic cation transporter (PUP)


Gene families : OG0000721 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000721_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g005820.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00197770 PUP4, ATPUP4,... Solute transport.carrier-mediated transport.DMT... 0.03 OrthoFinder output from all 47 species
AMTR_s00135p00097090 PUP1, ATPUP1,... Solute transport.carrier-mediated transport.DMT... 0.03 OrthoFinder output from all 47 species
AMTR_s00135p00099660 PUP1, ATPUP1,... Solute transport.carrier-mediated transport.DMT... 0.05 OrthoFinder output from all 47 species
AT2G33750 ATPUP2, PUP2 purine permease 2 0.04 OrthoFinder output from all 47 species
AT4G18205 No alias Nucleotide-sugar transporter family protein 0.03 OrthoFinder output from all 47 species
AT4G18210 ATPUP10, PUP10 purine permease 10 0.04 OrthoFinder output from all 47 species
Adi_g001169 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105179 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30858 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33273 PUP1, ATPUP1 organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15848 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene39612.t1 ATPUP3, PUP3,... organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60644.t1 ATPUP3, PUP3,... organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0057.g034276 PUP1, ATPUP1 organic cation transporter *(PUP) & original... 0.04 OrthoFinder output from all 47 species
Cba_g18304 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75386 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G095800.1 PUP1, ATPUP1,... organic cation transporter *(PUP) & original... 0.04 OrthoFinder output from all 47 species
Ceric.04G055300.1 PUP1, ATPUP1,... organic cation transporter *(PUP) & original... 0.05 OrthoFinder output from all 47 species
Dac_g01642 No alias organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16593 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22363 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_02956 PUP1, ATPUP1 organic cation transporter (PUP) 0.03 OrthoFinder output from all 47 species
Gb_32685 ATPUP3, PUP3 organic cation transporter (PUP) 0.04 OrthoFinder output from all 47 species
LOC_Os02g46380.1 ATPUP11, PUP11,... organic cation transporter (PUP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g49748.1 ATPUP11, PUP11,... organic cation transporter (PUP) 0.03 OrthoFinder output from all 47 species
LOC_Os09g29239.1 ATPUP3, PUP3,... organic cation transporter (PUP) 0.03 OrthoFinder output from all 47 species
MA_580238g0010 ATPUP11, PUP11 organic cation transporter (PUP) 0.04 OrthoFinder output from all 47 species
Msp_g25477 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09776 ATPUP11, PUP11 organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30461 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31642 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.05 OrthoFinder output from all 47 species
Smo236291 ATPUP5, PUP5 Solute transport.carrier-mediated transport.DMT... 0.04 OrthoFinder output from all 47 species
Smo417455 ATPUP5, PUP5 Solute transport.carrier-mediated transport.DMT... 0.05 OrthoFinder output from all 47 species
Solyc12g087870.2.1 PUP1, ATPUP1,... organic cation transporter (PUP) 0.03 OrthoFinder output from all 47 species
Spa_g22681 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41091 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20525 PUP1, ATPUP1 organic cation transporter *(PUP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e034411_P001 ATPUP3, PUP3,... organic cation transporter (PUP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!