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  5. Solyc03g007170.3.1

Solyc03g007170.3.1 (ATFKBP53, FKBP53,...)


Aliases : ATFKBP53, FKBP53, Solyc03g007170

Description : protein folding catalyst (FKBP)


Gene families : OG0000169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g007170.3.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00068660 ATFKBP53,... Protein modification.protein folding and quality... 0.06 OrthoFinder output from all 47 species
AMTR_s00135p00035680 evm_27.TU.AmTr_v1... Protein modification.protein folding and quality... 0.04 OrthoFinder output from all 47 species
AT3G12340 No alias FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.05 OrthoFinder output from all 47 species
Aob_g14555 ATFKBP53, FKBP53 peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.04 OrthoFinder output from all 47 species
Aob_g15897 FKBP15-2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0232.g059319 No alias peptidyl-prolyl cis-trans isomerase *(FKBP12) & original... 0.04 OrthoFinder output from all 47 species
Cba_g66337 FKBP12, ATFKBP12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G067700.1 FKBP15-2, Ceric.35G067700 peptidyl-prolyl cis-trans isomerase *(FKBP15-1/2) &... 0.02 OrthoFinder output from all 47 species
Cre14.g616100 ATFKBP53, FKBP53 Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Dac_g32620 ATFKBP53, FKBP53 peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.05 OrthoFinder output from all 47 species
Ehy_g12379 ATFKBP53, FKBP53 peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.03 OrthoFinder output from all 47 species
Ehy_g15501 ATFKBP53, FKBP53 peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01018518001 ATFKBP53, FKBP53 Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
GSVIVT01038075001 No alias Protein modification.protein folding and quality... 0.06 OrthoFinder output from all 47 species
Gb_36777 No alias protein folding catalyst (FKBP) 0.13 OrthoFinder output from all 47 species
LOC_Os04g36890.1 ATFKBP53,... protein folding catalyst (FKBP) 0.09 OrthoFinder output from all 47 species
Mp5g18010.1 ATFKBP53, FKBP53 protein folding catalyst (FKBP) 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g026003 ATFKBP53, FKBP53 peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.02 OrthoFinder output from all 47 species
Sam_g37835 No alias peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.02 OrthoFinder output from all 47 species
Spa_g24904 ATFKBP53, FKBP53 peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.06 OrthoFinder output from all 47 species
Zm00001e033723_P005 ATFKBP53,... protein folding catalyst (FKBP) 0.07 OrthoFinder output from all 47 species
Zm00001e040959_P001 ATFKBP53,... protein folding catalyst (FKBP) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001179 PPIase_FKBP_dom 387 477
IPR041232 NPL 3 94
No external refs found!