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  5. Solyc03g007870.3.1

Solyc03g007870.3.1 (Solyc03g007870)


Aliases : Solyc03g007870

Description : no hits & (original description: none)


Gene families : OG0001602 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001602_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g007870.3.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00240310 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 39... 0.03 OrthoFinder output from all 47 species
AT1G01490 No alias Heavy metal transport/detoxification superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G30473 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G63950 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G05920 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G26690 No alias Heavy metal transport/detoxification superfamily protein 0.07 OrthoFinder output from all 47 species
Aob_g24315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019413001 No alias Heavy metal-associated isoprenylated plant protein 39... 0.04 OrthoFinder output from all 47 species
GSVIVT01028844001 No alias Heavy metal-associated isoprenylated plant protein 39... 0.1 OrthoFinder output from all 47 species
GSVIVT01028846001 No alias Heavy metal-associated isoprenylated plant protein 39... 0.07 OrthoFinder output from all 47 species
GSVIVT01028847001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_25180 No alias Heavy metal-associated isoprenylated plant protein 39... 0.03 OrthoFinder output from all 47 species
Gb_25182 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_25183 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Gb_34631 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_35035 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_38465 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_38912 No alias Heavy metal-associated isoprenylated plant protein 39... 0.04 OrthoFinder output from all 47 species
LOC_Os01g48710.1 LOC_Os01g48710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g57200.1 LOC_Os04g57200 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Lfl_g22315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25053 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10435010g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_14611g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_18139g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_20255g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_32960g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_33140g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_38463g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_43035g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_43035g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_465568g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_553359g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_6098g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8368223g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_93016g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g28033 ATACA10, CIF1, ACA10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g049990.4.1 Solyc05g049990 Heavy metal-associated isoprenylated plant protein 39... 0.01 OrthoFinder output from all 47 species
Solyc06g036310.3.1 Solyc06g036310 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e006611_P002 Zm00001e006611 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e020167_P001 Zm00001e020167 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e039080_P001 Zm00001e039080 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e041844_P001 Zm00001e041844 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e041878_P001 Zm00001e041878 Heavy metal-associated isoprenylated plant protein 39... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 13 58
No external refs found!