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  5. Solyc03g013160.4.1

Solyc03g013160.4.1 (Solyc03g013160)


Aliases : Solyc03g013160

Description : solute transporter (AAAP)


Gene families : OG0000278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g013160.4.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00061580 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00251660 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
AMTR_s00066p00056580 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Aev_g37047 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11688 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47786 No alias solute transporter *(AAAP) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g50908 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g03383 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08482 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31436 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44421.t1 Aspi01Gene44421 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60519.t1 Aspi01Gene60519 solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71003.t1 Aspi01Gene71003 solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g010835 No alias solute transporter *(AAAP) & original description: CDS=1-1098 0.03 OrthoFinder output from all 47 species
Cba_g30124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14297 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18151 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g31336 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26363 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17279 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011399001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01011406001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
GSVIVT01020258001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
GSVIVT01020261001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
GSVIVT01034218001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01037496001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Gb_00870 No alias Amino acid transporter AVT1H OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g41420.1 LOC_Os01g41420 solute transporter (AAAP) 0.04 OrthoFinder output from all 47 species
LOC_Os04g38680.1 LOC_Os04g38680 solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Lfl_g21803 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25623 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_9551351g0010 No alias solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Ore_g19449 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25905 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43893 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32348 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Smo438611 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Solyc03g013440.4.1 Solyc03g013440 solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Spa_g40129 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07839 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020612_P001 Zm00001e020612 solute transporter (AAAP) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 37 417
No external refs found!