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  5. Solyc03g025770.4.1

Solyc03g025770.4.1 (Solyc03g025770)


Aliases : Solyc03g025770

Description : no hits & (original description: none)


Gene families : OG0000607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g025770.4.1
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00207060 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G07220 No alias Arabidopsis thaliana protein of unknown function (DUF821) 0.04 OrthoFinder output from all 47 species
AT2G45830 DTA2 downstream target of AGL15 2 0.04 OrthoFinder output from all 47 species
AT2G45840 No alias Arabidopsis thaliana protein of unknown function (DUF821) 0.03 OrthoFinder output from all 47 species
AT3G61270 No alias Arabidopsis thaliana protein of unknown function (DUF821) 0.03 OrthoFinder output from all 47 species
Aev_g08297 DTA2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66551.t1 Aspi01Gene66551 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66563.t1 Aspi01Gene66563 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75570 DTA2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03946 DTA2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026871001 DTA2 No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01026872001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01026877001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01026878001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_34471 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_34473 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g45160.1 LOC_Os04g45160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g05690.1 LOC_Os05g05690 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_10425862g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10435424g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_4631294g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_55748g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_689724g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8962570g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9103336g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_912717g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g39560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g52070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo419091 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g094380.2.1 Solyc01g094380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g025760.4.1 Solyc03g025760 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g048800.3.1 Solyc05g048800 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g24654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024271_P001 Zm00001e024271 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR006598 CAP10 91 486
No external refs found!