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  5. Solyc03g063050.1.1

Solyc03g063050.1.1 (Solyc03g063050)


Aliases : Solyc03g063050

Description : Amino acid transporter AVT1C OS=Arabidopsis thaliana (sp|f4iuw3|avt1c_arath : 174.0)


Gene families : OG0000278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g063050.1.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s02064p00009480 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G09330 No alias Transmembrane amino acid transporter family protein 0.03 OrthoFinder output from all 47 species
Aev_g36434 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08482 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011399001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01020258001 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01020262001 No alias Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
Gb_27840 No alias solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Gb_29633 No alias solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
LOC_Os01g40410.1 LOC_Os01g40410 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
LOC_Os01g41420.1 LOC_Os01g41420 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
LOC_Os02g01100.1 LOC_Os02g01100 solute transporter (AAAP) 0.04 OrthoFinder output from all 47 species
LOC_Os04g38680.1 LOC_Os04g38680 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Len_g59781 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g21803 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_9551351g0010 No alias solute transporter (AAAP) 0.04 OrthoFinder output from all 47 species
Ore_g22994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29742 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g098380.3.1 Solyc09g098380 solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Spa_g11824 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 139 240
No external refs found!