Solyc03g096610.2.1 (Solyc03g096610)


Aliases : Solyc03g096610

Description : Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana (sp|q9c501|ppr70_arath : 540.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g096610.2.1

Target Alias Description ECC score Gene Family Method Actions
AT4G16470 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g003753 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004274 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21218 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23848 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37868 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35879 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19004 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02554.t1 Aspi01Gene02554 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31801.t1 Aspi01Gene31801 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene37985.t1 DOT4, Aspi01Gene37985 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04075 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13545 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G071400.1 CRR22, Ceric.32G071400 not classified & original description: pacid=50598182... 0.03 OrthoFinder output from all 47 species
Cre12.g483720 No alias Cell cycle.organelle machineries.DNA... 0.01 OrthoFinder output from all 47 species
Dcu_g06339 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08185 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26576 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38699 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43291 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12887 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35743 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20812 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g27790.1 REME1, LOC_Os06g27790 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
LOC_Os09g24640.1 REME1, LOC_Os09g24640 Pentatricopeptide repeat-containing protein At2g36730... 0.04 OrthoFinder output from all 47 species
Lfl_g04986 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19289 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25656 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33055 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03543 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14691 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23950 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45873 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20192 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32187 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g01500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42021 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14311 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22252 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16487 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31376 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43237 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024361 OTP84 cyclin-dependent kinase inhibitor *(KRP/ICK) & original... 0.02 OrthoFinder output from all 47 species
Sam_g16744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo34638 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Smo79732 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Smo91949 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Spa_g05402 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g15017 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33712 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g47167 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50449 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g54818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57153 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35678 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e031693_P001 Zm00001e031693 Pentatricopeptide repeat-containing protein At4g14050,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 389 413
IPR002885 Pentatricopeptide_repeat 285 308
IPR002885 Pentatricopeptide_repeat 176 201
IPR002885 Pentatricopeptide_repeat 210 235
IPR002885 Pentatricopeptide_repeat 74 103
IPR002885 Pentatricopeptide_repeat 316 361
No external refs found!