Aliases : AGO1, Solyc03g098280
Description : RIS-Complex miRNA recruiting factor (AGO1)
Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00203090 | AGO4, OCP11,... | Chromatin organisation.DNA methylation.canonical... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00058p00069070 | AGO7, ZIP,... | Chromatin organisation.DNA methylation.canonical... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00122p00122810 | PNH, AGO10, ZLL,... | Chromatin organisation.DNA methylation.canonical... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G48410 | AGO1 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.05 | OrthoFinder output from all 47 species | |
| AT2G27040 | AGO4, OCP11 | Argonaute family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G43810 | PNH, AGO10, ZLL | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g088499 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g113326 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g35634 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g58865 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g11029 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.28G056900.1 | AGO1, Ceric.28G056900 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g16554 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g05037 | PNH, AGO10, ZLL | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18181 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01018054001 | PNH, AGO10, ZLL | Chromatin organisation.DNA methylation.canonical... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01029383001 | AGO1 | Chromatin organisation.DNA methylation.canonical... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01037488001 | AGO4, OCP11 | Chromatin organisation.DNA methylation.canonical... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_34718 | PNH, AGO10, ZLL | Protein argonaute 10 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g58490.1 | AGO1, LOC_Os02g58490 | RIS-Complex miRNA recruiting factor (AGO1) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os04g06770.2 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g47870.1 | AGO1, LOC_Os04g47870 | RIS-Complex miRNA recruiting factor (AGO1) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g39640.1 | PNH, AGO10, ZLL,... | RIS-Complex miRNA recruiting factor (AGO1) | 0.05 | OrthoFinder output from all 47 species | |
| Len_g08293 | PNH, AGO10, ZLL | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18589 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g40869 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06710 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10427420g0010 | AGO1 | Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| MA_118377g0010 | AGO1 | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g18110.1 | AGO1 | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g13472 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g14613 | AGO4, OCP11 | siRNA-integrating factor *(AGO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g21068 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g07722 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g20845 | PNH, AGO10, ZLL | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g66376 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c17_350V3.1 | AGO1, Pp3c17_350 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g10517 | No alias | siRNA-integrating factor *(AGO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g05727 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g09278 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12263 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029696_P001 | AGO1, Zm00001e029696 | RIS-Complex miRNA recruiting factor (AGO1) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e037347_P002 | PNH, AGO10, ZLL,... | RIS-Complex miRNA recruiting factor (AGO1) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e041452_P004 | AGO1, Zm00001e041452 | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
| CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | HCCA |
| BP | GO:0000272 | polysaccharide catabolic process | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| CC | GO:0005680 | anaphase-promoting complex | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0016160 | amylase activity | IEP | HCCA |
| MF | GO:0016161 | beta-amylase activity | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| No external refs found! |
