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  5. Solyc03g111450.3.1

Solyc03g111450.3.1 (HAP5A, NF-YC1,...)


Aliases : HAP5A, NF-YC1, ATHAP5A, Solyc03g111450

Description : component NF-YC of NF-Y transcription factor complex


Gene families : OG0001038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001038_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc03g111450.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00257290 NF-YC3,... RNA biosynthesis.transcriptional activation.NF-Y... 0.04 OrthoFinder output from all 47 species
AT1G56170 NF-YC2, ATHAP5B, HAP5B nuclear factor Y, subunit C2 0.08 OrthoFinder output from all 47 species
AT5G38140 NF-YC12 nuclear factor Y, subunit C12 0.05 OrthoFinder output from all 47 species
AT5G50480 NF-YC6 nuclear factor Y, subunit C6 0.03 OrthoFinder output from all 47 species
Aev_g05830 HAP5A, NF-YC1, ATHAP5A component *(NF-YC) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01030963001 HAP5A, NF-YC1, ATHAP5A Nuclear transcription factor Y subunit C-4... 0.08 OrthoFinder output from all 47 species
LOC_Os04g58680.1 NF-YC2, ATHAP5B,... component NF-YC of NF-Y transcription factor complex 0.07 OrthoFinder output from all 47 species
LOC_Os08g10560.1 NF-YC2, ATHAP5B,... component NF-YC of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Pp3c9_5650V3.1 NF-YC2, ATHAP5B,... nuclear factor Y, subunit C4 0.01 OrthoFinder output from all 47 species
Zm00001e034481_P001 NF-YC3, Zm00001e034481 component NF-YC of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Zm00001e039944_P001 NF-YC2, ATHAP5B,... component NF-YC of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 104 166
No external refs found!