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  5. Solyc03g113940.4.1

Solyc03g113940.4.1 (Solyc03g113940)


Aliases : Solyc03g113940

Description : Calmodulin-binding protein 60 A OS=Arabidopsis thaliana (sp|c0svv6|cb60a_arath : 142.0)


Gene families : OG0000494 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000494_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g113940.4.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00092720 evm_27.TU.AmTr_v1... Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT1G73805 No alias Calmodulin binding protein-like 0.03 OrthoFinder output from all 47 species
AT2G24300 No alias Calmodulin-binding protein 0.03 OrthoFinder output from all 47 species
AT5G26920 CBP60G Cam-binding protein 60-like G 0.04 OrthoFinder output from all 47 species
AT5G57580 No alias Calmodulin-binding protein 0.04 OrthoFinder output from all 47 species
Adi_g053429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08200 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
GSVIVT01008322001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01008323001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01008324001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_39213 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g04280.1 LOC_Os01g04280 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os08g27170.1 LOC_Os08g27170 Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os09g13890.1 LOC_Os09g13890 Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os11g44170.1 LOC_Os11g44170 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g44600.1 LOC_Os11g44600 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g36110.1 LOC_Os12g36110 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os12g36910.1 LOC_Os12g36910 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g36920.1 LOC_Os12g36920 Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_18754g0010 No alias Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_37755g0020 No alias Calmodulin-binding protein 60 C OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc01g100240.3.1 Solyc01g100240 Calmodulin-binding protein 60 C OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc02g079040.3.1 Solyc02g079040 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g009210.4.1 Solyc10g009210 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e004278_P001 Zm00001e004278 Calmodulin-binding protein 60 C OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e016998_P001 Zm00001e016998 Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e039693_P002 Zm00001e039693 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR012416 CBP60 54 318
No external refs found!