Solyc03g117360.4.1 (TPL, WSIP1, Solyc03g117360)


Aliases : TPL, WSIP1, Solyc03g117360

Description : transcriptional repressor (TPL). transcriptional co-repressor (TPL/TPR)


Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g117360.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00079490 TPR1,... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.02 OrthoFinder output from all 47 species
AT1G15750 TPL, WSIP1 Transducin family protein / WD-40 repeat family protein 0.03 OrthoFinder output from all 47 species
Adi_g072245 WSIP2, TPR4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g117102 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Ala_g18277 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene35980.t2 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene40866.t1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene45821.t1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene54212.t1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Dde_g05960 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08671 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Gb_39002 TPR2 transcriptional repressor (TPL). transcriptional... 0.05 OrthoFinder output from all 47 species
LOC_Os01g15020.1 TPR2, LOC_Os01g15020 transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
MA_366520g0010 TPL, WSIP1 Protein TPR2 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
Ore_g35084 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020365 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Tin_g04747 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Tin_g06694 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 477 511
IPR001680 WD40_repeat 936 969
No external refs found!