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  5. Solyc03g119770.4.1

Solyc03g119770.4.1 (TCP12, BRC2, Solyc03g119770)


Aliases : TCP12, BRC2, Solyc03g119770

Description : transcription factor (TCP)


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g119770.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00158020 TCP4, MEE35,... RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
AT1G68800 TCP12, BRC2 TCP domain protein 12 0.04 OrthoFinder output from all 47 species
Aev_g30836 TCP10 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07553 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02922.t1 ATTCP24, TCP24,... TCP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene52180.t1 TCP3, Aspi01Gene52180 TCP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene55158.t1 TCP5, Aspi01Gene55158 TCP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01008109001 TCP5 RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
GSVIVT01011962001 TCP12, BRC2 RNA biosynthesis.transcriptional activation.TCP... 0.09 OrthoFinder output from all 47 species
LOC_Os01g11550.1 TCP4, MEE35,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os01g55750.1 TCP5, LOC_Os01g55750 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
LOC_Os03g49880.1 TCP12, BRC2,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Ore_g04093 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g25790 TCP2 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26630 TCP2 TCP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Solyc01g016414.1.1 TCP10, Solyc01g016414 transcription factor (TCP) 0.01 OrthoFinder output from all 47 species
Solyc10g008780.1.1 TCP10, Solyc10g008780 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 111 252
No external refs found!