1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g120020.4.1

Solyc03g120020.4.1 (ATBOR4, BOR4, Solyc03g120020)


Aliases : ATBOR4, BOR4, Solyc03g120020

Description : borate transporter (BOR)


Gene families : OG0000669 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000669_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g120020.4.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00052p00085150 ATBOR4, BOR4,... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
AT3G62270 No alias HCO3- transporter family 0.03 OrthoFinder output from all 47 species
AT4G32510 No alias HCO3- transporter family 0.03 OrthoFinder output from all 47 species
Adi_g011879 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18421 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44112 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19089 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15865 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52938.t1 Aspi01Gene52938 borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04720 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12787 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22323 No alias borate transporter *(BOR) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08591 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_14917 ATBOR4, BOR4 borate transporter (BOR) 0.03 OrthoFinder output from all 47 species
Len_g08603 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39771 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426403g0010 No alias borate transporter (BOR) 0.06 OrthoFinder output from all 47 species
MA_10430817g0010 No alias borate transporter (BOR) 0.03 OrthoFinder output from all 47 species
Ore_g16043 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57363 No alias borate transporter *(BOR) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06939 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014194 No alias borate transporter *(BOR) & original description: CDS=1-1965 0.02 OrthoFinder output from all 47 species
Spa_g56699 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08961 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006820 monoatomic anion transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR011531 HCO3_transpt-like_TM_dom 482 572
IPR011531 HCO3_transpt-like_TM_dom 29 206
IPR011531 HCO3_transpt-like_TM_dom 227 400
No external refs found!