Solyc04g005570.4.1 (Solyc04g005570)


Aliases : Solyc04g005570

Description : p24-delta COPI trafficking regulator protein


Gene families : OG0001151 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001151_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g005570.4.1

Target Alias Description ECC score Gene Family Method Actions
AT1G57620 No alias emp24/gp25L/p24 family/GOLD family protein 0.05 OrthoFinder output from all 47 species
Aop_g01040 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Cre07.g315900 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
GSVIVT01022966001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 OrthoFinder output from all 47 species
MA_10042785g0010 No alias p24-delta COPI trafficking regulator protein 0.02 OrthoFinder output from all 47 species
Msp_g10335 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.04 OrthoFinder output from all 47 species
Ore_g07502 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
Pir_g47371 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012264 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
Smo74858 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008154 actin polymerization or depolymerization IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030041 actin filament polymerization IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR009038 GOLD_dom 25 210
No external refs found!