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  5. Solyc04g005850.1.1

Solyc04g005850.1.1 (Solyc04g005850)


Aliases : Solyc04g005850

Description : component EXO84 of Exocyst complex


Gene families : OG0001285 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001285_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g005850.1.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT1G10385 No alias Vps51/Vps67 family (components of vesicular transport) protein 0.07 OrthoFinder output from all 47 species
Ala_g14838 EXO84B component *(EXO84) of Exocyst complex & original... 0.04 OrthoFinder output from all 47 species
Aop_g05307 EXO84B component *(EXO84) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene13194.t1 EXO84B, Aspi01Gene13194 component *(EXO84) of Exocyst complex & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene66720.t1 EXO84B, Aspi01Gene66720 component *(EXO84) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01020112001 No alias Vesicle trafficking.target membrane tethering.Exocyst... 0.04 OrthoFinder output from all 47 species
Gb_20183 EXO84B component EXO84 of Exocyst complex 0.03 OrthoFinder output from all 47 species
Lfl_g21387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g00682 No alias component *(EXO84) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
Pir_g00653 EXO84B component *(EXO84) of Exocyst complex & original... 0.02 OrthoFinder output from all 47 species
Pnu_g13059 EXO84B component *(EXO84) of Exocyst complex & original... 0.04 OrthoFinder output from all 47 species
Ppi_g05271 EXO84B component *(EXO84) of Exocyst complex & original... 0.02 OrthoFinder output from all 47 species
Ppi_g05905 EXO84B component *(EXO84) of Exocyst complex & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0033176 proton-transporting V-type ATPase complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032403 Exo84_C 147 356
No external refs found!