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  5. Solyc04g007855.1.1

Solyc04g007855.1.1 (CRK8, Solyc04g007855)


Aliases : CRK8, Solyc04g007855

Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 152.0)


Gene families : OG0000741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000741_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g007855.1.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Solyc01g066445.1.1 ORF240B, Solyc01g066445 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder output from all 47 species
Solyc01g067403.1.1 CRK8, Solyc01g067403 Retrovirus-related Pol polyprotein from transposon RE2... 0.02 OrthoFinder output from all 47 species
Solyc03g062835.1.1 CRK8, Solyc03g062835 Retrovirus-related Pol polyprotein from transposon RE1... 0.04 OrthoFinder output from all 47 species
Solyc03g083485.1.1 CRK8, Solyc03g083485 Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species
Solyc04g050865.1.1 CRK8, Solyc04g050865 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder output from all 47 species
Solyc04g071675.1.1 CRK8, Solyc04g071675 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder output from all 47 species
Solyc05g015493.1.1 CRK8, Solyc05g015493 Retrovirus-related Pol polyprotein from transposon RE2... 0.04 OrthoFinder output from all 47 species
Solyc06g034395.1.1 ORF240B, Solyc06g034395 Retrovirus-related Pol polyprotein from transposon RE1... 0.04 OrthoFinder output from all 47 species
Solyc06g048825.1.1 CRK8, Solyc06g048825 Retrovirus-related Pol polyprotein from transposon RE2... 0.02 OrthoFinder output from all 47 species
Solyc06g060735.1.1 CRK8, Solyc06g060735 Retrovirus-related Pol polyprotein from transposon RE1... 0.04 OrthoFinder output from all 47 species
Solyc07g019493.1.1 CRK8, Solyc07g019493 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder output from all 47 species
Solyc08g014612.1.1 CRK8, Solyc08g014612 Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species
Solyc09g064243.1.1 CRK8, Solyc09g064243 Uncharacterized mitochondrial protein AtMg00810... 0.02 OrthoFinder output from all 47 species
Solyc12g040642.1.1 CRK8, Solyc12g040642 Retrovirus-related Pol polyprotein from transposon RE2... 0.05 OrthoFinder output from all 47 species
Solyc12g042855.1.1 CRK8, Solyc12g042855 Retrovirus-related Pol polyprotein from transposon RE2... 0.03 OrthoFinder output from all 47 species
Solyc12g062203.1.1 CRK8, Solyc12g062203 Retrovirus-related Pol polyprotein from transposon RE2... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA

No InterPro domains available for this sequence

No external refs found!