1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g007900.3.1

Solyc04g007900.3.1 (PCR2, Solyc04g007900)


Aliases : PCR2, Solyc04g007900

Description : Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana (sp|q9lqu4|pcr2_arath : 178.0)


Gene families : OG0000293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g007900.3.1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00033430 evm_27.TU.AmTr_v1... Cell number regulator 10 OS=Zea mays 0.02 OrthoFinder output from all 47 species
AT1G14870 PCR2 PLANT CADMIUM RESISTANCE 2 0.04 OrthoFinder output from all 47 species
AT1G14880 PCR1 PLANT CADMIUM RESISTANCE 1 0.06 OrthoFinder output from all 47 species
AT1G52200 No alias PLAC8 family protein 0.05 OrthoFinder output from all 47 species
AT2G40935 No alias PLAC8 family protein 0.02 OrthoFinder output from all 47 species
Aev_g06552 PCR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08035 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15484.t1 Aspi01Gene15484 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G039000.1 Ceric.05G039000 not classified & original description: pacid=50578200... 0.03 OrthoFinder output from all 47 species
Ceric.07G075800.1 Ceric.07G075800 not classified & original description: pacid=50626192... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.49 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g16541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011687001 PCR2 Cell number regulator 2 OS=Zea mays 0.1 OrthoFinder output from all 47 species
GSVIVT01011927001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01031753001 No alias Cell number regulator 1 OS=Zea mays 0.04 OrthoFinder output from all 47 species
GSVIVT01031754001 PCR2 Cell number regulator 1 OS=Zea mays 0.03 OrthoFinder output from all 47 species
Gb_37164 No alias Cell number regulator 2 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Gb_37165 No alias Cell number regulator 9 OS=Zea mays... 0.04 OrthoFinder output from all 47 species
LOC_Os02g36940.1 LOC_Os02g36940 Cell number regulator 2 OS=Zea mays... 0.04 OrthoFinder output from all 47 species
Len_g49051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_79837g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_8647295g0010 No alias Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Mp4g22340.1 No alias Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Nbi_g05225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g005470.3.1 PCR2, Solyc01g005470 Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
Solyc03g119660.2.1 Solyc03g119660 Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc03g120600.4.1 Solyc03g120600 Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Solyc06g066590.4.1 Solyc06g066590 Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e011704_P001 PCR2, Zm00001e011704 Cell number regulator 10 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Zm00001e023819_P001 Zm00001e023819 Cell number regulator 1 OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006952 defense response IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 53 151
No external refs found!