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  5. Solyc04g008000.3.1

Solyc04g008000.3.1 (Solyc04g008000)


Aliases : Solyc04g008000

Description : Probable calcium-binding protein CML25 OS=Arabidopsis thaliana (sp|q9fyk2|cml25_arath : 180.0)


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g008000.3.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT1G24620 No alias EF hand calcium-binding protein family 0.06 OrthoFinder output from all 47 species
AT3G03430 No alias Calcium-binding EF-hand family protein 0.06 OrthoFinder output from all 47 species
AT5G17480 APC1, PC1 pollen calcium-binding protein 1 0.08 OrthoFinder output from all 47 species
Adi_g010598 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02825 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16081 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51502 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00581 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13370 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07767.t1 Aspi01Gene07767 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67143.t1 Aspi01Gene67143 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30308 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39853 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g30390 TCH2, CML24 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g44660.1 APC1, PC1, LOC_Os08g44660 Polcalcin Phl p 7 OS=Phleum pratense... 0.1 OrthoFinder output from all 47 species
Msp_g20815 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g118810.1.1 Solyc03g118810 Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.04 OrthoFinder output from all 47 species
Spa_g09952 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016987_P001 Zm00001e016987 Probable calcium-binding protein CML16 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 44 105
No external refs found!