Solyc04g009120.3.1 (Solyc04g009120)

Aliases : Solyc04g009120

Description : Putative disease resistance RPP13-like protein 3 OS=Arabidopsis thaliana (sp|q9ste7|r13l3_arath : 145.0)

Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g009120.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00061p00205780	evm_27.TU.AmTr_v1...	Putative disease resistance RPP13-like protein 3...	0.04	OrthoFinder output from all 47 species
AMTR_s00088p00054890	evm_27.TU.AmTr_v1...	No description available	0.05	OrthoFinder output from all 47 species
AMTR_s00088p00057720	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
LOC_Os08g14810.1	ZAR1, LOC_Os08g14810	no description available(sp\|p0do08\|pikm2_orysj : 132.0)	0.02	OrthoFinder output from all 47 species
LOC_Os11g13440.1	LOC_Os11g13440	no description available(sp\|q2r8l1\|rga5s_orysj : 304.0)	0.02	OrthoFinder output from all 47 species
Solyc02g084890.3.1	ZAR1, Solyc02g084890	Disease resistance RPP13-like protein 4 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
Solyc04g009690.2.1	RPP13, Solyc04g009690	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004649	poly(ADP-ribose) glycohydrolase activity	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	3	66

External Links

No external refs found!