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  5. Solyc04g009240.2.1

Solyc04g009240.2.1 (RPP13, Solyc04g009240)


Aliases : RPP13, Solyc04g009240

Description : Disease resistance protein RPP13 OS=Arabidopsis thaliana (sp|q9m667|rpp13_arath : 450.0)


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g009240.2.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00245940 evm_27.TU.AmTr_v1... Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00152710 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00088p00057720 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00090p00091780 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00090p00137350 RPP13,... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00205p00026120 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G58400 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G58410 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
AT5G35450 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
GSVIVT01026825001 No alias Putative disease resistance protein At1g50180... 0.02 OrthoFinder output from all 47 species
GSVIVT01032830001 No alias Probable disease resistance RPP8-like protein 2... 0.03 OrthoFinder output from all 47 species
Gb_10845 LOV1 Putative disease resistance protein RGA3 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Gb_25799 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.04 OrthoFinder output from all 47 species
Gb_25803 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.04 OrthoFinder output from all 47 species
Gb_26463 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Gb_27427 ZAR1 Putative disease resistance protein RGA3 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Gb_32662 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.03 OrthoFinder output from all 47 species
LOC_Os02g35210.1 LOC_Os02g35210 no description available(sp|q2r8l1|rga5s_orysj : 458.0) 0.01 OrthoFinder output from all 47 species
LOC_Os08g14800.1 LOC_Os08g14800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g28570.1 LOC_Os08g28570 no description available(sp|q2r8l1|rga5s_orysj : 394.0) 0.02 OrthoFinder output from all 47 species
LOC_Os12g29280.1 LOC_Os12g29280 Putative disease resistance protein RGA1 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Solyc03g005650.1.1 Solyc03g005650 Probable disease resistance protein At1g58390... 0.03 OrthoFinder output from all 47 species
Solyc03g005670.3.1 Solyc03g005670 Disease resistance RPP8-like protein 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc04g009110.1.1 RPP13, Solyc04g009110 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc04g009290.1.1 RPP13, Solyc04g009290 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc04g009690.2.1 RPP13, Solyc04g009690 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc07g039410.3.1 Solyc07g039410 Putative disease resistance RPP13-like protein 3... 0.05 OrthoFinder output from all 47 species
Solyc07g053010.3.1 ZAR1, Solyc07g053010 Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc07g053020.3.1 ZAR1, Solyc07g053020 Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc08g005440.3.1 RPM1, RPS3,... RPM1 effector-triggered immunity CC-NLR-type effector receptor 0.04 OrthoFinder output from all 47 species
Solyc11g010160.1.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e011093_P001 ZAR1, Zm00001e011093 no description available(sp|f7j0n2|rga5r_orysj : 358.0) 0.03 OrthoFinder output from all 47 species
Zm00001e036637_P001 Zm00001e036637 Putative disease resistance protein At1g50180... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 165 408
IPR041118 Rx_N 5 97
No external refs found!