1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g009760.2.1

Solyc04g009760.2.1 (Solyc04g009760)


Aliases : Solyc04g009760

Description : no description available(sp|q65xs5|bc10_orysj : 95.9)


Gene families : OG0000231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g009760.2.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT1G68380 No alias Core-2/I-branching... 0.03 OrthoFinder output from all 47 species
AT5G14550 No alias Core-2/I-branching... 0.03 OrthoFinder output from all 47 species
Aev_g38612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04348 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g50040.1 LOC_Os01g50040 no description available(sp|q65xs5|bc10_orysj : 323.0) 0.03 OrthoFinder output from all 47 species
LOC_Os04g51794.2 LOC_Os04g51794 no description available(sp|q65xs5|bc10_orysj : 176.0) 0.03 OrthoFinder output from all 47 species
LOC_Os06g45110.1 LOC_Os06g45110 no description available(sp|q65xs5|bc10_orysj : 184.0) 0.02 OrthoFinder output from all 47 species
LOC_Os08g12890.1 LOC_Os08g12890 no description available(sp|q65xs5|bc10_orysj : 172.0) 0.05 OrthoFinder output from all 47 species
LOC_Os12g43880.1 LOC_Os12g43880 no description available(sp|q65xs5|bc10_orysj : 149.0) 0.04 OrthoFinder output from all 47 species
Len_g11551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_66615g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g09438 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo65497 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc02g086550.3.1 Solyc02g086550 no description available(sp|q65xs5|bc10_orysj : 491.0) 0.03 OrthoFinder output from all 47 species
Spa_g51357 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e014285_P001 Zm00001e014285 no description available(sp|q65xs5|bc10_orysj : 122.0) 0.04 OrthoFinder output from all 47 species
Zm00001e026725_P003 Zm00001e026725 no description available(sp|q65xs5|bc10_orysj : 579.0) 0.02 OrthoFinder output from all 47 species
Zm00001e029160_P001 Zm00001e029160 no description available(sp|q65xs5|bc10_orysj : 176.0) 0.03 OrthoFinder output from all 47 species
Zm00001e041599_P001 Zm00001e041599 no description available(sp|q65xs5|bc10_orysj : 166.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 73 310
No external refs found!