Aliases : Solyc04g010230
Description : Probable pectate lyase 4 OS=Arabidopsis thaliana (sp|q9c8g4|ply4_arath : 189.0) & Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase(50.4.2 : 172.3)
Gene families : OG0005451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005451_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g020819 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016073 | snRNA metabolic process | IEP | HCCA |
| BP | GO:0016180 | snRNA processing | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034472 | snRNA 3'-end processing | IEP | HCCA |
| BP | GO:0034477 | U6 snRNA 3'-end processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002022 | Pec_lyase | 76 | 237 |
| No external refs found! |
