Solyc04g014510.3.1 (ATGSR1, GLN1;1,...)

Aliases : ATGSR1, GLN1;1, ATGLN1;1, GSR 1, Solyc04g014510

Description : cytosolic glutamine synthetase (GLN1)

Gene families : OG0000646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000646_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g014510.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00241880	ATGSR1, GLN1;1,...	Nutrient uptake.nitrogen assimilation.ammonium...	0.03	OrthoFinder output from all 47 species
AT1G66200	ATGSR2, GLN1;2, GSR2	glutamine synthase clone F11	0.11	OrthoFinder output from all 47 species
AT5G37600	ATGSR1, GLN1;1,...	glutamine synthase clone R1	0.09	OrthoFinder output from all 47 species
Adi_g004718	ATGSR1, GLN1;1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g11795	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Als_g44837	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.04	OrthoFinder output from all 47 species
Als_g45891	ATGSR2, GLN1;2, GSR2	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0008.g011642	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Ceric.03G083600.1	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Ceric.20G000200.1	GLN1;4, Ceric.20G000200	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.04	OrthoFinder output from all 47 species
Ceric.39G059200.1	GLN1;4, Ceric.39G059200	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.06	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000889.10	GLN1.3, ATGSKB6, GLN1;3	Nutrient uptake.nitrogen assimilation.ammonium...	0.01	OrthoFinder output from all 47 species
Cre02.g113200	GLN1.3, ATGSKB6, GLN1;3	Nutrient uptake.nitrogen assimilation.ammonium...	0.01	OrthoFinder output from all 47 species
Dac_g37528	GLN1;4	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
LOC_Os03g50490.1	ATGSR1, GLN1;1,...	cytosolic glutamine synthetase (GLN1)	0.02	OrthoFinder output from all 47 species
Len_g05760	GLN1;4	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Len_g44821	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Lfl_g11416	GLN1;4	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.01	OrthoFinder output from all 47 species
MA_39847g0010	GLN1.3, ATGSKB6, GLN1;3	cytosolic glutamine synthetase (GLN1)	0.02	OrthoFinder output from all 47 species
Mp1g03980.1	ATGSR1, GLN1;1,...	cytosolic glutamine synthetase (GLN1)	0.05	OrthoFinder output from all 47 species
Mp5g13580.1	ATGSR1, GLN1;1,...	cytosolic glutamine synthetase (GLN1)	0.03	OrthoFinder output from all 47 species
Mp6g06750.1	GLN1;4	cytosolic glutamine synthetase (GLN1)	0.02	OrthoFinder output from all 47 species
Mp8g01410.1	GLN1.3, ATGSKB6, GLN1;3	Glutamine synthetase, chloroplastic OS=Chlamydomonas...	0.02	OrthoFinder output from all 47 species
Msp_g01055	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Msp_g38785	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Pir_g08935	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Ppi_g05089	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Ppi_g61508	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023030	GLN1;4	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Zm00001e000880_P002	ATGSR1, GLN1;1,...	Glutamine synthetase root isozyme 1 OS=Zea mays...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004356	glutamate-ammonia ligase activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006541	glutamine metabolic process	None	Extended
BP	GO:0006542	glutamine biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009064	glutamine family amino acid metabolic process	None	Extended
BP	GO:0009084	glutamine family amino acid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016211	ammonia ligase activity	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0016880	acid-ammonia (or amide) ligase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	HCCA
BP	GO:0006099	tricarboxylic acid cycle	IEP	HCCA
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	HCCA
BP	GO:0015977	carbon fixation	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0045735	nutrient reservoir activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008147	Gln_synt_N	22	97
IPR008146	Gln_synth_cat_dom	169	347

External Links

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Solyc04g014510.3.1 (ATGSR1, GLN1;1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation