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  5. Solyc04g015110.3.1

Solyc04g015110.3.1 (Solyc04g015110)


Aliases : Solyc04g015110

Description : WEB family protein At5g55860 OS=Arabidopsis thaliana (sp|q9lvq4|y5586_arath : 177.0)


Gene families : OG0000579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g015110.3.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT1G12150 No alias Plant protein of unknown function (DUF827) 0.03 OrthoFinder output from all 47 species
AT1G45545 No alias Plant protein of unknown function (DUF827) 0.03 OrthoFinder output from all 47 species
AT4G17210 No alias Plant protein of unknown function (DUF827) 0.03 OrthoFinder output from all 47 species
Als_g32868 WEB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g41700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G094200.1 Ceric.02G094200 not classified & original description: pacid=50583920... 0.02 OrthoFinder output from all 47 species
Dac_g28043 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03104 WEB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os09g28450.1 LOC_Os09g28450 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1... 0.04 OrthoFinder output from all 47 species
Ore_g35433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g14710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g088830.3.1 WEB1, Solyc12g088830 component WEB1 of WEB1-PMI2 cp-actin filament... 0.04 OrthoFinder output from all 47 species
Zm00001e009948_P001 Zm00001e009948 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1... 0.06 OrthoFinder output from all 47 species
Zm00001e034348_P003 Zm00001e034348 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR008545 Web 45 604
No external refs found!