Solyc04g024540.1.1 (YCF2.1, Solyc04g024540)


Aliases : YCF2.1, Solyc04g024540

Description : regulatory component YCF2 of AAA-ATPase motor complex


Gene families : OG0003470 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003470_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g024540.1.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00217120 YCF2.1,... Protein Ycf2 OS=Amborella trichopoda 0.02 OrthoFinder output from all 47 species
AMTR_s00543p00008950 YCF2.1,... Protein Ycf2 OS=Morus indica 0.04 OrthoFinder output from all 47 species
ATCG00860 YCF2.1 Chloroplast Ycf2;ATPase, AAA type, core 0.05 OrthoFinder output from all 47 species
ATCG01280 YCF2.2 Chloroplast Ycf2;ATPase, AAA type, core 0.05 OrthoFinder output from all 47 species
GSVIVT01029119001 YCF2.1 Protein Ycf2 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
GSVIVT01029605001 No alias Protein Ycf2 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Zm00001e009619_P001 YCF2.1, Zm00001e009619 Protein Ycf2 OS=Lemna minor (sp|a9l9d9|ycf2_lemmi : 100.0) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0009507 chloroplast IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008543 Uncharacterised_Ycf2 505 580
IPR008543 Uncharacterised_Ycf2 70 170
IPR008543 Uncharacterised_Ycf2 1 69
IPR008543 Uncharacterised_Ycf2 170 446
IPR008543 Uncharacterised_Ycf2 447 506
No external refs found!