Aliases : CEN2, CEN1, ATCEN2, Solyc04g026350
Description : DNA repair protein (CEN2). centrin component CEN of TREX-2 mRNP trafficking complex
Gene families : OG0001195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001195_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc04g026350.3.1 | |
| Cluster | HCCA: Cluster_105 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G50360 | CEN2, CEN1, ATCEN2 | centrin2 | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g33333 | CEN2 | calcium sensor *(CML) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g38419 | CEN2 | calcium sensor *(CML) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g36586 | CEN2 | calcium sensor *(CML) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g27907 | No alias | calcium sensor *(CML) & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005509 | calcium ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| CC | GO:0005681 | spliceosomal complex | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| No external refs found! |
